Download or read book Accelerating Radiation Dose Calculation with High Performance Computing and Machine Learning for Large-scale Radiotherapy Treatment Planning written by Ryan Neph and published by . This book was released on 2020 with total page 156 pages. Available in PDF, EPUB and Kindle. Book excerpt: Radiation therapy is powered by modern techniques in precise planning and execution of radiation delivery, which are being rapidly improved to maximize its benefit to cancer patients. In the last decade, radiotherapy experienced the introduction of advanced methods for automatic beam orientation optimization, real-time tumor tracking, daily plan adaptation, and many others, which improve the radiation delivery precision, planning ease and reproducibility, and treatment efficacy. However, such advanced paradigms necessitate the calculation of orders of magnitude more causal dose deposition data, increasing the time requirement of all pre-planning dose calculation. Principles of high-performance computing and machine learning were applied to address the insufficient speeds of widely-used dose calculation algorithms to facilitate translation of these advanced treatment paradigms into clinical practice. To accelerate CT-guided X-ray therapies, Collapsed-Cone Convolution-Superposition (CCCS), a state-of-the-art analytical dose calculation algorithm, was accelerated through its novel implementation on highly parallelized GPUs. This context-based GPU-CCCS approach takes advantage of X-ray dose deposition compactness to parallelize calculation across hundreds of beamlets, reducing hardware-specific overheads, and enabling acceleration by two to three orders of magnitude compared to existing GPU-based beamlet-by-beamlet approaches. Near-linear increases in acceleration are achieved with a distributed, multi-GPU implementation of context-based GPU-CCCS. Dose calculation for MR-guided treatment is complicated by electron return effects (EREs), exhibited by ionizing electrons in the strong magnetic field of the MRI scanner. EREs necessitate the use of much slower Monte Carlo (MC) dose calculation, limiting the clinical application of advanced treatment paradigms due to time restrictions. An automatically distributed framework for very-large-scale MC dose calculation was developed, granting linear scaling of dose calculation speed with the number of utilized computational cores. It was then harnessed to efficiently generate a large dataset of paired high- and low-noise MC doses in a 1.5 tesla magnetic field, which were used to train a novel deep convolutional neural network (CNN), DeepMC, to predict low-noise dose from faster high-noise MC- simulation. DeepMC enables 38-fold acceleration of MR-guided X-ray beamlet dose calculation, while remaining synergistic with existing MC acceleration techniques to achieve multiplicative speed improvements. This work redefines the expectation of X-ray dose calculation speed, making it possible to apply new highly-beneficial treatment paradigms to standard clinical practice for the first time.